As most of you are probably aware, Sean released HMMER3.0b3 last month. The beta 3 version of HMMER3.0 contains a few bug fixes and the four HMMER3 search programs now allow multi-core parallelisation. We’ve just updated all of the Pfam sequence search tools to use the new HMMER3.0 beta 3 release, so we thought we’d update you on what these changes mean for Pfam. Read the rest of this entry »